Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.76■□□□□ 0.27
RTN3O95197 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.76■□□□□ 0.27
RTN3O95197 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.76■□□□□ 0.27
RTN3O95197 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.76■□□□□ 0.27
RTN3O95197 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.76■□□□□ 0.27
RTN3O95197 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.76■□□□□ 0.27
RTN3O95197 SRD5A3P1-201ENST00000603021 949 ntBASIC16.76■□□□□ 0.27
RTN3O95197 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RTN3O95197 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTN3O95197 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RTN3O95197 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.76■□□□□ 0.27
RTN3O95197 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTN3O95197 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RTN3O95197 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 AC134407.2-201ENST00000625089 1978 ntBASIC16.75■□□□□ 0.27
RTN3O95197 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 AC104640.1-201ENST00000562617 2109 ntBASIC16.75■□□□□ 0.27
RTN3O95197 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.75■□□□□ 0.27
RTN3O95197 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.75■□□□□ 0.27
RTN3O95197 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 Z97205.2-201ENST00000564697 1639 ntBASIC16.75■□□□□ 0.27
RTN3O95197 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.75■□□□□ 0.27
RTN3O95197 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RTN3O95197 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.75■□□□□ 0.27
RTN3O95197 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
RTN3O95197 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RTN3O95197 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.75■□□□□ 0.27
RTN3O95197 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.75■□□□□ 0.27
RTN3O95197 DFFBP1-201ENST00000433250 979 ntBASIC16.75■□□□□ 0.27
RTN3O95197 AL353779.1-201ENST00000434793 351 ntBASIC16.75■□□□□ 0.27
RTN3O95197 AC093004.1-201ENST00000508850 424 ntBASIC16.75■□□□□ 0.27
RTN3O95197 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.75■□□□□ 0.27
RTN3O95197 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.75■□□□□ 0.27
RTN3O95197 TIMM17BP1-201ENST00000545713 516 ntBASIC16.75■□□□□ 0.27
RTN3O95197 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.75■□□□□ 0.27
RTN3O95197 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.75■□□□□ 0.27
RTN3O95197 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.75■□□□□ 0.27
RTN3O95197 AL132655.2-201ENST00000596276 594 ntBASIC16.75■□□□□ 0.27
RTN3O95197 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.75■□□□□ 0.27
RTN3O95197 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RTN3O95197 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RTN3O95197 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
RTN3O95197 AL391825.1-201ENST00000457671 1364 ntBASIC16.75■□□□□ 0.27
RTN3O95197 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.75■□□□□ 0.27
RTN3O95197 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
RTN3O95197 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN3O95197 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RTN3O95197 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 AC007541.1-201ENST00000570282 1469 ntBASIC16.74■□□□□ 0.27
RTN3O95197 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.74■□□□□ 0.27
RTN3O95197 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
RTN3O95197 SPDYE19P-201ENST00000338590 713 ntBASIC16.74■□□□□ 0.27
RTN3O95197 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.74■□□□□ 0.27
RTN3O95197 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms