Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 AC010336.2-201ENST00000564226 506 ntBASIC14.95□□□□□ -0.02
LDB3O75112 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LDB3O75112 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LDB3O75112 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 AC087499.5-201ENST00000452760 1342 ntBASIC14.94□□□□□ -0.02
LDB3O75112 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.94□□□□□ -0.02
LDB3O75112 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.94□□□□□ -0.02
LDB3O75112 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 MIR770-201ENST00000390219 98 ntBASIC14.94□□□□□ -0.02
LDB3O75112 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 TSSK5P-201ENST00000423978 907 ntBASIC14.94□□□□□ -0.02
LDB3O75112 BASP1P1-201ENST00000430708 665 ntBASIC14.94□□□□□ -0.02
LDB3O75112 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.94□□□□□ -0.02
LDB3O75112 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LDB3O75112 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 HNRNPUP1-201ENST00000554987 333 ntBASIC14.94□□□□□ -0.02
LDB3O75112 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.94□□□□□ -0.02
LDB3O75112 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.94□□□□□ -0.02
LDB3O75112 AL844908.2-201ENST00000609461 460 ntBASIC14.94□□□□□ -0.02
LDB3O75112 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.94□□□□□ -0.02
LDB3O75112 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LDB3O75112 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.94□□□□□ -0.02
LDB3O75112 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LDB3O75112 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.93□□□□□ -0.02
LDB3O75112 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.93□□□□□ -0.02
LDB3O75112 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LDB3O75112 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.93□□□□□ -0.02
LDB3O75112 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.93□□□□□ -0.02
LDB3O75112 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.93□□□□□ -0.02
LDB3O75112 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.93□□□□□ -0.02
LDB3O75112 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.93□□□□□ -0.02
LDB3O75112 AL512638.1-201ENST00000457493 794 ntBASIC14.93□□□□□ -0.02
LDB3O75112 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.93□□□□□ -0.02
LDB3O75112 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.93□□□□□ -0.02
LDB3O75112 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.93□□□□□ -0.02
LDB3O75112 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.93□□□□□ -0.02
LDB3O75112 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.93□□□□□ -0.02
LDB3O75112 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LDB3O75112 MIR4313-201ENST00000580760 101 ntBASIC14.93□□□□□ -0.02
LDB3O75112 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.93□□□□□ -0.02
LDB3O75112 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.93□□□□□ -0.02
LDB3O75112 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.93□□□□□ -0.02
LDB3O75112 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.93□□□□□ -0.02
LDB3O75112 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.93□□□□□ -0.02
LDB3O75112 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms