Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA1FO60840 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 OR8S1-201ENST00000310194 1080 ntBASIC19.62■□□□□ 0.73
CACNA1FO60840 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CACNA1FO60840 HLA-K-203ENST00000430151 1046 ntBASIC19.62■□□□□ 0.73
CACNA1FO60840 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.62■□□□□ 0.73
CACNA1FO60840 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CACNA1FO60840 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.62■□□□□ 0.73
CACNA1FO60840 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 AC022532.1-201ENST00000624563 1728 ntBASIC19.62■□□□□ 0.73
CACNA1FO60840 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
CACNA1FO60840 AL139094.1-201ENST00000405549 1188 ntBASIC19.61■□□□□ 0.73
CACNA1FO60840 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.61■□□□□ 0.73
CACNA1FO60840 AC106760.1-201ENST00000508690 800 ntBASIC19.61■□□□□ 0.73
CACNA1FO60840 AP001063.1-201ENST00000568332 529 ntBASIC19.61■□□□□ 0.73
CACNA1FO60840 AC244669.2-201ENST00000612320 853 ntBASIC19.61■□□□□ 0.73
CACNA1FO60840 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.61■□□□□ 0.73
CACNA1FO60840 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CACNA1FO60840 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CACNA1FO60840 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.61■□□□□ 0.73
CACNA1FO60840 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 AC008894.3-201ENST00000624324 3103 ntBASIC19.61■□□□□ 0.73
CACNA1FO60840 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CACNA1FO60840 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CACNA1FO60840 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.61■□□□□ 0.73
CACNA1FO60840 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 AP001582.1-201ENST00000525856 295 ntBASIC19.61■□□□□ 0.73
CACNA1FO60840 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
CACNA1FO60840 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1FO60840 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CACNA1FO60840 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CACNA1FO60840 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
CACNA1FO60840 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 POM121L8P-201ENST00000417732 1281 ntBASIC19.6■□□□□ 0.73
CACNA1FO60840 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 POM121L9P-203ENST00000441984 1285 ntBASIC19.6■□□□□ 0.73
CACNA1FO60840 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.6■□□□□ 0.73
CACNA1FO60840 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 CLUHP6-201ENST00000580789 941 ntBASIC19.6■□□□□ 0.73
CACNA1FO60840 AC233724.13-201ENST00000598383 410 ntBASIC19.6■□□□□ 0.73
CACNA1FO60840 AL603764.1-201ENST00000636452 321 ntBASIC19.6■□□□□ 0.73
CACNA1FO60840 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CACNA1FO60840 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1FO60840 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1FO60840 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA1FO60840 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.59■□□□□ 0.73
CACNA1FO60840 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 AC234783.1-201ENST00000441761 496 ntBASIC19.59■□□□□ 0.73
CACNA1FO60840 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA1FO60840 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.59■□□□□ 0.73
CACNA1FO60840 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 TDH-203ENST00000531764 1110 ntBASIC19.59■□□□□ 0.73
CACNA1FO60840 HILS1-202ENST00000545329 423 ntBASIC19.59■□□□□ 0.73
CACNA1FO60840 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA1FO60840 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms