Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.37□□□□□ -0.43
PDE6DO43924 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.37□□□□□ -0.43
PDE6DO43924 AL645929.1-201ENST00000420084 975 ntBASIC12.37□□□□□ -0.43
PDE6DO43924 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 PRYP5-201ENST00000451909 266 ntBASIC12.37□□□□□ -0.43
PDE6DO43924 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PDE6DO43924 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.37□□□□□ -0.43
PDE6DO43924 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6DO43924 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.37□□□□□ -0.43
PDE6DO43924 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.37□□□□□ -0.43
PDE6DO43924 AC139887.4-201ENST00000607877 719 ntBASIC12.37□□□□□ -0.43
PDE6DO43924 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.37□□□□□ -0.43
PDE6DO43924 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
PDE6DO43924 TMEM191A-211ENST00000637163 1067 ntBASIC12.37□□□□□ -0.43
PDE6DO43924 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PDE6DO43924 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.37□□□□□ -0.43
PDE6DO43924 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PDE6DO43924 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PDE6DO43924 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.37□□□□□ -0.43
PDE6DO43924 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
PDE6DO43924 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PDE6DO43924 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 AC023024.2-201ENST00000623561 1993 ntBASIC12.36□□□□□ -0.43
PDE6DO43924 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.36□□□□□ -0.43
PDE6DO43924 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 KRT18P38-201ENST00000449496 1282 ntBASIC12.36□□□□□ -0.43
PDE6DO43924 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.36□□□□□ -0.43
PDE6DO43924 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.36□□□□□ -0.43
PDE6DO43924 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.36□□□□□ -0.43
PDE6DO43924 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.36□□□□□ -0.43
PDE6DO43924 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
PDE6DO43924 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.36□□□□□ -0.43
PDE6DO43924 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PDE6DO43924 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6DO43924 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6DO43924 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
PDE6DO43924 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.35□□□□□ -0.43
PDE6DO43924 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms