Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
UPK2O00526 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 KRT8P37-201ENST00000451609 1420 ntBASIC12.78□□□□□ -0.36
UPK2O00526 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UPK2O00526 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
UPK2O00526 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK2O00526 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
UPK2O00526 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK2O00526 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.77□□□□□ -0.36
UPK2O00526 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
UPK2O00526 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.77□□□□□ -0.36
UPK2O00526 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK2O00526 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK2O00526 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.77□□□□□ -0.36
UPK2O00526 AC127383.1-201ENST00000444697 1800 ntBASIC12.77□□□□□ -0.37
UPK2O00526 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
UPK2O00526 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK2O00526 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.77□□□□□ -0.37
UPK2O00526 ADH5P3-201ENST00000433842 1137 ntBASIC12.77□□□□□ -0.37
UPK2O00526 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.77□□□□□ -0.37
UPK2O00526 SPCS2P4-201ENST00000436160 681 ntBASIC12.77□□□□□ -0.37
UPK2O00526 PHKG1P2-201ENST00000457537 863 ntBASIC12.77□□□□□ -0.37
UPK2O00526 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
UPK2O00526 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK2O00526 LINC01225-203ENST00000563550 1244 ntBASIC12.77□□□□□ -0.37
UPK2O00526 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.77□□□□□ -0.37
UPK2O00526 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.77□□□□□ -0.37
UPK2O00526 AC026979.3-201ENST00000607315 403 ntBASIC12.77□□□□□ -0.37
UPK2O00526 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.77□□□□□ -0.37
UPK2O00526 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 PCDHA3-202ENST00000532566 4594 ntBASIC12.77□□□□□ -0.37
UPK2O00526 AC112693.3-201ENST00000624819 1983 ntBASIC12.77□□□□□ -0.37
UPK2O00526 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
UPK2O00526 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.77□□□□□ -0.37
UPK2O00526 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
UPK2O00526 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK2O00526 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
UPK2O00526 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK2O00526 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 CYP4F24P-201ENST00000586049 1580 ntBASIC12.77□□□□□ -0.37
UPK2O00526 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.77□□□□□ -0.37
UPK2O00526 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK2O00526 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
UPK2O00526 TNRC18P2-201ENST00000417666 2714 ntBASIC12.76□□□□□ -0.37
UPK2O00526 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.76□□□□□ -0.37
UPK2O00526 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK2O00526 AC023824.1-201ENST00000562945 2975 ntBASIC12.76□□□□□ -0.37
UPK2O00526 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK2O00526 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
UPK2O00526 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK2O00526 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK2O00526 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
UPK2O00526 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.76□□□□□ -0.37
UPK2O00526 AC079140.1-201ENST00000508039 487 ntBASIC12.76□□□□□ -0.37
UPK2O00526 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 KRT8P48-201ENST00000515599 1220 ntBASIC12.76□□□□□ -0.37
UPK2O00526 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK2O00526 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.76□□□□□ -0.37
UPK2O00526 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK2O00526 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK2O00526 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK2O00526 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK2O00526 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK2O00526 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK2O00526 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms