Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 LAGE3P1-201ENST00000425356 484 ntBASIC17.03■□□□□ 0.32
CTAGE9A4FU28 DUSP5P1-201ENST00000441325 1139 ntBASIC17.03■□□□□ 0.32
CTAGE9A4FU28 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 MIR4321-201ENST00000592276 80 ntBASIC17.03■□□□□ 0.32
CTAGE9A4FU28 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CTAGE9A4FU28 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 AC148477.4-201ENST00000613430 1793 ntBASIC17.02■□□□□ 0.32
CTAGE9A4FU28 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 AJ011931.1-201ENST00000618749 2492 ntBASIC17.02■□□□□ 0.32
CTAGE9A4FU28 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 FGFR3P6-201ENST00000457012 610 ntBASIC17.02■□□□□ 0.32
CTAGE9A4FU28 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 LINC01711-201ENST00000598340 967 ntBASIC17.02■□□□□ 0.32
CTAGE9A4FU28 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 AC025062.2-201ENST00000605477 670 ntBASIC17.02■□□□□ 0.32
CTAGE9A4FU28 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CTAGE9A4FU28 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 AC104581.4-201ENST00000623126 3052 ntBASIC17.02■□□□□ 0.31
CTAGE9A4FU28 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CTAGE9A4FU28 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 HMGA1P7-201ENST00000406908 502 ntBASIC17.01■□□□□ 0.31
CTAGE9A4FU28 TSPY19P-201ENST00000418461 509 ntBASIC17.01■□□□□ 0.31
CTAGE9A4FU28 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 TSPY18P-201ENST00000441642 509 ntBASIC17.01■□□□□ 0.31
CTAGE9A4FU28 SCARNA2-201ENST00000458748 420 ntBASIC17.01■□□□□ 0.31
CTAGE9A4FU28 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 AC008608.2-201ENST00000606089 416 ntBASIC17.01■□□□□ 0.31
CTAGE9A4FU28 AC008667.4-201ENST00000607370 168 ntBASIC17.01■□□□□ 0.31
CTAGE9A4FU28 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CTAGE9A4FU28 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms