Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 AZGP1P1-201ENST00000411909 902 ntBASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 SPDYE7P-202ENST00000420373 878 ntBASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 HLA-J-203ENST00000494367 1087 ntBASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 AL512356.2-201ENST00000546955 174 ntBASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 FAM45BP-202ENST00000592932 1624 ntBASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 AC092127.1-201ENST00000567093 3455 ntBASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC162PA2VCL2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 AC104640.1-201ENST00000562617 2109 ntBASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 TSEN15P1-201ENST00000423257 515 ntBASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 AC069262.1-201ENST00000539058 672 ntBASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 AC079781.4-201ENST00000641908 219 ntBASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC162PA2VCL2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 AL035456.1-201ENST00000456064 1369 ntBASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 SPDYE17-201ENST00000412399 783 ntBASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 AP001160.2-201ENST00000596071 487 ntBASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms