Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ZBTB45P2-201ENST00000452245 1531 ntBASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 C1QL1P1-201ENST00000568105 661 ntBASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 AL354811.1-201ENST00000610286 706 ntBASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
LINC01558Q9Y6Z2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 AL031731.1-201ENST00000642131 2094 ntBASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LINC01558Q9Y6Z2 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CICP1-201ENST00000416803 2410 ntBASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 ATP5G2P3-201ENST00000429083 425 ntBASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 KRT18P65-201ENST00000439811 1286 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms