Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 GGT3P-204ENST00000453783 1664 ntBASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCH2Q9Y6C5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 Z97180.1-201ENST00000445173 988 ntBASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 AC114501.1-201ENST00000445949 172 ntBASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SERPINA13P-202ENST00000478994 924 ntBASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 RN7SL574P-201ENST00000581512 297 ntBASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCH2Q9Y6C5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 IQSEC3P1-201ENST00000538799 536 ntBASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 RN7SL555P-201ENST00000584742 339 ntBASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCH2Q9Y6C5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.71■□□□□ 0.42
PTCH2Q9Y6C5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms