Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 AC026366.1-201ENST00000488803 879 ntBASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 MIR193BHG-211ENST00000641433 5365 ntBASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 AC089987.1-201ENST00000551654 2209 ntBASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.08□□□□□ -0.47
TRAPPC1Q9Y5R8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRAPPC1Q9Y5R8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TRAPPC1Q9Y5R8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRAPPC1Q9Y5R8 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TRAPPC1Q9Y5R8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 AC007663.1-201ENST00000438948 1240 ntBASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 AP005242.2-201ENST00000580065 1175 ntBASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 CD177P1-201ENST00000606252 935 ntBASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 AC116562.4-202ENST00000641738 218 ntBASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAPPC1Q9Y5R8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 ZBED1P1-201ENST00000502364 1930 ntBASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms