Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 AC006449.6-201ENST00000612330 2296 ntBASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 PMS2P7-201ENST00000506558 1336 ntBASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 LINC00552-201ENST00000625151 2579 ntBASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 POLD2P1-201ENST00000511220 997 ntBASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 AC007064.4-201ENST00000637740 555 ntBASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3HCC1Q9Y3T6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 AC002310.6-201ENST00000624451 1377 ntBASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 CDC14C-201ENST00000428251 1719 ntBASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 AP000347.1-202ENST00000435868 847 ntBASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 HCG4B-203ENST00000450128 991 ntBASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 SLC25A6P2-201ENST00000497974 877 ntBASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 LINC02447-202ENST00000501888 2146 ntBASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms