Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.14■□□□□ 0.17
HACD3Q9P035 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 AC006058.4-201ENST00000624016 1670 ntBASIC16.14■□□□□ 0.17
HACD3Q9P035 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HACD3Q9P035 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 CYP4F24P-201ENST00000586049 1580 ntBASIC16.13■□□□□ 0.17
HACD3Q9P035 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
HACD3Q9P035 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.13■□□□□ 0.17
HACD3Q9P035 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 CNN2P2-201ENST00000443536 909 ntBASIC16.13■□□□□ 0.17
HACD3Q9P035 CNN2P3-201ENST00000450201 906 ntBASIC16.13■□□□□ 0.17
HACD3Q9P035 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.13■□□□□ 0.17
HACD3Q9P035 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.13■□□□□ 0.17
HACD3Q9P035 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.13■□□□□ 0.17
HACD3Q9P035 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.13■□□□□ 0.17
HACD3Q9P035 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 AL136317.3-201ENST00000618497 906 ntBASIC16.13■□□□□ 0.17
HACD3Q9P035 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HACD3Q9P035 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.13■□□□□ 0.17
HACD3Q9P035 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HACD3Q9P035 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HACD3Q9P035 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.12■□□□□ 0.17
HACD3Q9P035 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
HACD3Q9P035 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HACD3Q9P035 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
HACD3Q9P035 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 TSPY26P-202ENST00000565928 3884 ntBASIC16.12■□□□□ 0.17
HACD3Q9P035 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
HACD3Q9P035 AL136982.4-201ENST00000437689 1740 ntBASIC16.12■□□□□ 0.17
HACD3Q9P035 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.12■□□□□ 0.17
HACD3Q9P035 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.12■□□□□ 0.17
HACD3Q9P035 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.12■□□□□ 0.17
HACD3Q9P035 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.12■□□□□ 0.17
HACD3Q9P035 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 AC004449.1-201ENST00000564240 433 ntBASIC16.12■□□□□ 0.17
HACD3Q9P035 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms