Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19■□□□□ 0.63
SALL1Q9NSC2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19■□□□□ 0.63
SALL1Q9NSC2 AC119751.2-201ENST00000504529 210 ntBASIC19■□□□□ 0.63
SALL1Q9NSC2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19■□□□□ 0.63
SALL1Q9NSC2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19■□□□□ 0.63
SALL1Q9NSC2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19■□□□□ 0.63
SALL1Q9NSC2 MIR4313-201ENST00000580760 101 ntBASIC19■□□□□ 0.63
SALL1Q9NSC2 BTNL10-201ENST00000595971 695 ntBASIC19■□□□□ 0.63
SALL1Q9NSC2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 SOCS2P1-201ENST00000417727 557 ntBASIC18.99■□□□□ 0.63
SALL1Q9NSC2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 VDAC1P7-201ENST00000462417 847 ntBASIC18.99■□□□□ 0.63
SALL1Q9NSC2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 AC233724.13-201ENST00000598383 410 ntBASIC18.99■□□□□ 0.63
SALL1Q9NSC2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.99■□□□□ 0.63
SALL1Q9NSC2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL1Q9NSC2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.98■□□□□ 0.63
SALL1Q9NSC2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL1Q9NSC2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC105917.1-201ENST00000506637 2539 ntBASIC18.97■□□□□ 0.63
SALL1Q9NSC2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms