Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 AC008677.1-201ENST00000519230 1561 ntBASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 MIR6080-201ENST00000617359 66 ntBASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NECTIN3Q9NQS3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AL592424.1-201ENST00000563624 1536 ntBASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AC018529.1-201ENST00000613063 361 ntBASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.29■□□□□ 0.04
NECTIN3Q9NQS3 AC106028.4-201ENST00000614509 607 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms