Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
RTN4Q9NQC3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 KRT18P57-201ENST00000443599 1254 ntBASIC18.94■□□□□ 0.62
RTN4Q9NQC3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 AC089987.1-201ENST00000551654 2209 ntBASIC18.94■□□□□ 0.62
RTN4Q9NQC3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4Q9NQC3 CASC19-229ENST00000641418 1373 ntBASIC18.93■□□□□ 0.62
RTN4Q9NQC3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 AL135999.2-201ENST00000622438 1686 ntBASIC18.93■□□□□ 0.62
RTN4Q9NQC3 AL353593.2-201ENST00000602529 1483 ntBASIC18.93■□□□□ 0.62
RTN4Q9NQC3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 AC111152.3-201ENST00000569699 673 ntBASIC18.93■□□□□ 0.62
RTN4Q9NQC3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 CICP16-201ENST00000502609 2813 ntBASIC18.93■□□□□ 0.62
RTN4Q9NQC3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms