Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 AL627231.1-201ENST00000394467 1125 ntBASIC14.43□□□□□ -0.1
CHD8Q9HCK8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 AC005324.6-201ENST00000587972 613 ntBASIC14.43□□□□□ -0.1
CHD8Q9HCK8 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 AC004554.1-201ENST00000422830 1468 ntBASIC14.43□□□□□ -0.1
CHD8Q9HCK8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.43□□□□□ -0.1
CHD8Q9HCK8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD8Q9HCK8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 NUDT4P2-201ENST00000578341 546 ntBASIC14.42□□□□□ -0.1
CHD8Q9HCK8 AC002472.4-201ENST00000641915 272 ntBASIC14.42□□□□□ -0.1
CHD8Q9HCK8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 AL391280.1-201ENST00000506969 1062 ntBASIC14.42□□□□□ -0.1
CHD8Q9HCK8 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CHD8Q9HCK8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 AC107464.3-201ENST00000609172 737 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ENPP7P14-201ENST00000621765 1040 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 IL9RP3-201ENST00000442856 1674 ntBASIC14.41□□□□□ -0.1
CHD8Q9HCK8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHD8Q9HCK8 KRT8P29-201ENST00000420409 1371 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms