Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 FOSL1P1-201ENST00000511041 816 ntBASIC17.81■□□□□ 0.44
TRIM5Q9C035 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 AP002469.2-201ENST00000531724 424 ntBASIC17.81■□□□□ 0.44
TRIM5Q9C035 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.81■□□□□ 0.44
TRIM5Q9C035 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM5Q9C035 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM5Q9C035 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 FGD5P1-202ENST00000614866 2498 ntBASIC17.8■□□□□ 0.44
TRIM5Q9C035 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 LAGE3P1-201ENST00000425356 484 ntBASIC17.8■□□□□ 0.44
TRIM5Q9C035 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 AC025062.2-201ENST00000605477 670 ntBASIC17.8■□□□□ 0.44
TRIM5Q9C035 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM5Q9C035 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM5Q9C035 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM5Q9C035 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM5Q9C035 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM5Q9C035 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM5Q9C035 AC126365.1-201ENST00000578585 1514 ntBASIC17.79■□□□□ 0.44
TRIM5Q9C035 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM5Q9C035 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM5Q9C035 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM5Q9C035 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM5Q9C035 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM5Q9C035 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM5Q9C035 HMGA1P7-201ENST00000406908 502 ntBASIC17.79■□□□□ 0.44
TRIM5Q9C035 PMS2P4-201ENST00000412466 1052 ntBASIC17.79■□□□□ 0.44
TRIM5Q9C035 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM5Q9C035 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms