Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 HLF-202ENST00000430986 1385 ntTSL 2 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 FAM197Y6-201ENST00000420524 766 ntBASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 RN7SL81P-201ENST00000493781 261 ntBASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 HLA-J-204ENST00000495278 958 ntBASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 AL590235.1-201ENST00000564650 861 ntBASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 AC010632.2-201ENST00000588369 1224 ntBASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 SIGLEC18P-201ENST00000602271 909 ntBASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 AP001184.1-201ENST00000637936 376 ntBASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 AF274858.1-201ENST00000406288 372 ntBASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 AC026470.1-201ENST00000478038 846 ntBASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 AC106047.2-201ENST00000511723 743 ntBASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 MIR4640-201ENST00000581824 90 ntBASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 AC090510.3-201ENST00000615831 821 ntBASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL25A1Q9BXS0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL25A1Q9BXS0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.64■□□□□ 0.1
COL25A1Q9BXS0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.1
COL25A1Q9BXS0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 OR51A9P-201ENST00000422578 911 ntBASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 AC063952.3-201ENST00000467756 308 ntBASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 AC108724.1-201ENST00000481669 352 ntBASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 MRPL22P1-201ENST00000505398 616 ntBASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 LINC01783-202ENST00000614408 828 ntBASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 BX284668.2-205ENST00000619677 828 ntBASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL25A1Q9BXS0 KRT8P21-201ENST00000430398 1491 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms