Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 AL139288.1-201ENST00000623748 933 ntBASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 IL9RP2-201ENST00000423948 1312 ntBASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 ACTG1P4-201ENST00000425123 1122 ntBASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 PMS2P1-201ENST00000431037 1228 ntBASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 AP000347.1-202ENST00000435868 847 ntBASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 AC139887.3-201ENST00000568585 713 ntBASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 AC005562.1-201ENST00000583030 3219 ntBASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NDUFAF3Q9BU61 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 HLA-A-202ENST00000376806 1854 ntBASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFAF3Q9BU61 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms