Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 MIR3197-201ENST00000582241 73 ntBASIC14.35□□□□□ -0.11
USB1Q9BQ65 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AL512652.2-201ENST00000625156 1716 ntBASIC14.35□□□□□ -0.11
USB1Q9BQ65 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AL645728.1-201ENST00000366221 2101 ntBASIC14.35□□□□□ -0.11
USB1Q9BQ65 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
USB1Q9BQ65 AL009178.2-201ENST00000597278 2719 ntBASIC14.35□□□□□ -0.11
USB1Q9BQ65 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
USB1Q9BQ65 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 AC078925.2-201ENST00000624013 1973 ntBASIC14.34□□□□□ -0.11
USB1Q9BQ65 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 MIR943-201ENST00000401286 94 ntBASIC14.34□□□□□ -0.11
USB1Q9BQ65 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 SPCS2P1-201ENST00000561636 679 ntBASIC14.34□□□□□ -0.11
USB1Q9BQ65 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 AJ011932.1-201ENST00000621707 465 ntBASIC14.34□□□□□ -0.11
USB1Q9BQ65 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 AC126755.1-201ENST00000525846 6405 ntBASIC14.34□□□□□ -0.11
USB1Q9BQ65 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
USB1Q9BQ65 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
USB1Q9BQ65 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
USB1Q9BQ65 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
USB1Q9BQ65 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
USB1Q9BQ65 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.33□□□□□ -0.11
USB1Q9BQ65 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.33□□□□□ -0.11
USB1Q9BQ65 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms