Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL19Q99731 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL19Q99731 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL19Q99731 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL19Q99731 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL19Q99731 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CCL19Q99731 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL19Q99731 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CCL19Q99731 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL19Q99731 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL19Q99731 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCL19Q99731 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL19Q99731 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCL19Q99731 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL19Q99731 AC026954.1-201ENST00000429771 1293 ntBASIC13.33□□□□□ -0.28
CCL19Q99731 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 AP001582.1-201ENST00000525856 295 ntBASIC13.33□□□□□ -0.28
CCL19Q99731 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL19Q99731 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CCL19Q99731 HNRNPUP1-201ENST00000554987 333 ntBASIC13.33□□□□□ -0.28
CCL19Q99731 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL19Q99731 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL19Q99731 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL19Q99731 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL19Q99731 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL19Q99731 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL19Q99731 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL19Q99731 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCL19Q99731 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL19Q99731 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL19Q99731 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL19Q99731 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL19Q99731 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL19Q99731 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
CCL19Q99731 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL19Q99731 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCL19Q99731 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL19Q99731 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.32□□□□□ -0.28
CCL19Q99731 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL19Q99731 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCL19Q99731 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL19Q99731 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL19Q99731 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CCL19Q99731 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL19Q99731 AC022137.2-201ENST00000503482 481 ntBASIC13.32□□□□□ -0.28
CCL19Q99731 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL19Q99731 KRT18P25-201ENST00000508931 1278 ntBASIC13.32□□□□□ -0.28
CCL19Q99731 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL19Q99731 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL19Q99731 AC000095.1-201ENST00000603208 874 ntBASIC13.32□□□□□ -0.28
CCL19Q99731 AC093813.1-201ENST00000605066 256 ntBASIC13.32□□□□□ -0.28
CCL19Q99731 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL19Q99731 AC008687.7-202ENST00000637404 953 ntBASIC13.32□□□□□ -0.28
CCL19Q99731 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL19Q99731 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL19Q99731 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms