Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC073413.1-201ENST00000603927 732 ntBASIC16.07■□□□□ 0.16
NOTCH4Q99466 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 AL021578.1-201ENST00000613646 709 ntBASIC16.07■□□□□ 0.16
NOTCH4Q99466 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NOTCH4Q99466 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH4Q99466 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AC112504.1-201ENST00000623415 1841 ntBASIC16.06■□□□□ 0.16
NOTCH4Q99466 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 MIR4741-201ENST00000579822 90 ntBASIC16.06■□□□□ 0.16
NOTCH4Q99466 BX539320.1-201ENST00000623759 877 ntBASIC16.06■□□□□ 0.16
NOTCH4Q99466 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH4Q99466 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 AL022328.3-201ENST00000607943 679 ntBASIC16.06■□□□□ 0.16
NOTCH4Q99466 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH4Q99466 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 PCDHA14-201ENST00000506751 2298 ntBASIC16.05■□□□□ 0.16
NOTCH4Q99466 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms