Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
MUC4Q99102 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.66□□□□□ -0.54
MUC4Q99102 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MUC4Q99102 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MUC4Q99102 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MUC4Q99102 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MUC4Q99102 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
MUC4Q99102 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MUC4Q99102 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MUC4Q99102 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.65□□□□□ -0.54
MUC4Q99102 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.65□□□□□ -0.54
MUC4Q99102 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
MUC4Q99102 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.65□□□□□ -0.54
MUC4Q99102 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.65□□□□□ -0.54
MUC4Q99102 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 SPDYE11-202ENST00000450699 704 ntBASIC11.65□□□□□ -0.54
MUC4Q99102 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.65□□□□□ -0.54
MUC4Q99102 SPDYE9P-201ENST00000570642 692 ntBASIC11.65□□□□□ -0.54
MUC4Q99102 AC061975.2-201ENST00000581722 295 ntBASIC11.65□□□□□ -0.54
MUC4Q99102 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.65□□□□□ -0.54
MUC4Q99102 SPDYE10P-202ENST00000612005 668 ntBASIC11.65□□□□□ -0.54
MUC4Q99102 SPDYE8P-202ENST00000612377 668 ntBASIC11.65□□□□□ -0.54
MUC4Q99102 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.65□□□□□ -0.54
MUC4Q99102 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 AL589702.1-201ENST00000641229 1509 ntBASIC11.65□□□□□ -0.54
MUC4Q99102 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 AP001282.1-201ENST00000531301 1499 ntBASIC11.65□□□□□ -0.54
MUC4Q99102 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
MUC4Q99102 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.65□□□□□ -0.54
MUC4Q99102 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.65□□□□□ -0.54
MUC4Q99102 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
MUC4Q99102 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 AP002472.1-201ENST00000577490 586 ntBASIC11.65□□□□□ -0.54
MUC4Q99102 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.65□□□□□ -0.54
MUC4Q99102 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
MUC4Q99102 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.65□□□□□ -0.54
MUC4Q99102 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.65□□□□□ -0.54
MUC4Q99102 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MUC4Q99102 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
MUC4Q99102 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
MUC4Q99102 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
MUC4Q99102 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
MUC4Q99102 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
MUC4Q99102 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.55
MUC4Q99102 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MUC4Q99102 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.64□□□□□ -0.55
MUC4Q99102 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MUC4Q99102 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
MUC4Q99102 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MUC4Q99102 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
MUC4Q99102 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
MUC4Q99102 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MUC4Q99102 CICP24-201ENST00000605464 2705 ntBASIC11.64□□□□□ -0.55
MUC4Q99102 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MUC4Q99102 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MUC4Q99102 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
MUC4Q99102 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms