Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AC055717.3-201ENST00000622967 595 ntBASIC14.57□□□□□ -0.08
SNX18Q96RF0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 AC006486.2-201ENST00000624246 2199 ntBASIC14.57□□□□□ -0.08
SNX18Q96RF0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.57□□□□□ -0.08
SNX18Q96RF0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SNX18Q96RF0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.56□□□□□ -0.08
SNX18Q96RF0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.56□□□□□ -0.08
SNX18Q96RF0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 RPSAP43-201ENST00000402237 625 ntBASIC14.56□□□□□ -0.08
SNX18Q96RF0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 RPS8P6-201ENST00000426177 609 ntBASIC14.56□□□□□ -0.08
SNX18Q96RF0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AC092183.1-201ENST00000469884 875 ntBASIC14.56□□□□□ -0.08
SNX18Q96RF0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.56□□□□□ -0.08
SNX18Q96RF0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SNX18Q96RF0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNX18Q96RF0 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms