Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 AL512356.2-201ENST00000546955 174 ntBASIC16.4■□□□□ 0.22
HDAC11Q96DB2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC11Q96DB2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HDAC11Q96DB2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
HDAC11Q96DB2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 SPDYE7P-202ENST00000420373 878 ntBASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AL596442.2-201ENST00000610240 980 ntBASIC16.39■□□□□ 0.21
HDAC11Q96DB2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AC132872.4-202ENST00000622924 2756 ntBASIC16.39■□□□□ 0.21
HDAC11Q96DB2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HDAC11Q96DB2 AL035456.1-201ENST00000456064 1369 ntBASIC16.38■□□□□ 0.21
HDAC11Q96DB2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 PRAL-201ENST00000624952 3286 ntBASIC16.38■□□□□ 0.21
HDAC11Q96DB2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 HLA-J-203ENST00000494367 1087 ntBASIC16.38■□□□□ 0.21
HDAC11Q96DB2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 AC003101.2-201ENST00000612557 442 ntBASIC16.38■□□□□ 0.21
HDAC11Q96DB2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 MIR6080-201ENST00000617359 66 ntBASIC16.38■□□□□ 0.21
HDAC11Q96DB2 AC079781.4-201ENST00000641908 219 ntBASIC16.38■□□□□ 0.21
HDAC11Q96DB2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HDAC11Q96DB2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms