Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 KRT18P43-201ENST00000469825 1281 ntBASIC17.88■□□□□ 0.45
USP6NLQ92738 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.88■□□□□ 0.45
USP6NLQ92738 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6NLQ92738 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
USP6NLQ92738 AC093813.1-201ENST00000605066 256 ntBASIC17.88■□□□□ 0.45
USP6NLQ92738 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.88■□□□□ 0.45
USP6NLQ92738 AL354718.3-201ENST00000616414 581 ntBASIC17.88■□□□□ 0.45
USP6NLQ92738 CR382287.1-201ENST00000623954 586 ntBASIC17.88■□□□□ 0.45
USP6NLQ92738 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6NLQ92738 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
USP6NLQ92738 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
USP6NLQ92738 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.88■□□□□ 0.45
USP6NLQ92738 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
USP6NLQ92738 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
USP6NLQ92738 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6NLQ92738 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
USP6NLQ92738 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
USP6NLQ92738 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6NLQ92738 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
USP6NLQ92738 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6NLQ92738 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6NLQ92738 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6NLQ92738 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.87■□□□□ 0.45
USP6NLQ92738 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.87■□□□□ 0.45
USP6NLQ92738 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6NLQ92738 AC023310.1-201ENST00000554836 735 ntBASIC17.87■□□□□ 0.45
USP6NLQ92738 RHOQP1-201ENST00000555758 579 ntBASIC17.87■□□□□ 0.45
USP6NLQ92738 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.87■□□□□ 0.45
USP6NLQ92738 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.87■□□□□ 0.45
USP6NLQ92738 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6NLQ92738 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.87■□□□□ 0.45
USP6NLQ92738 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.87■□□□□ 0.45
USP6NLQ92738 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.87■□□□□ 0.45
USP6NLQ92738 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
USP6NLQ92738 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.87■□□□□ 0.45
USP6NLQ92738 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.87■□□□□ 0.45
USP6NLQ92738 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
USP6NLQ92738 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6NLQ92738 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6NLQ92738 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6NLQ92738 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6NLQ92738 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.86■□□□□ 0.45
USP6NLQ92738 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 AC134407.2-201ENST00000625089 1978 ntBASIC17.86■□□□□ 0.45
USP6NLQ92738 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6NLQ92738 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.86■□□□□ 0.45
USP6NLQ92738 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.86■□□□□ 0.45
USP6NLQ92738 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.86■□□□□ 0.45
USP6NLQ92738 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.86■□□□□ 0.45
USP6NLQ92738 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.86■□□□□ 0.45
USP6NLQ92738 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.86■□□□□ 0.45
USP6NLQ92738 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.86■□□□□ 0.45
USP6NLQ92738 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.86■□□□□ 0.45
USP6NLQ92738 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.86■□□□□ 0.45
USP6NLQ92738 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.86■□□□□ 0.45
USP6NLQ92738 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6NLQ92738 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.86■□□□□ 0.45
USP6NLQ92738 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
USP6NLQ92738 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6NLQ92738 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms