Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 AC006504.5-208ENST00000588784 2401 ntBASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 AL589702.1-201ENST00000641229 1509 ntBASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKAP2Q8WWK9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 AC117489.1-201ENST00000625169 3217 ntBASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.83■□□□□ 0.13
CKAP2Q8WWK9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.83■□□□□ 0.12
CKAP2Q8WWK9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 FAM8A3P-201ENST00000427218 844 ntBASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 AC006557.2-201ENST00000592985 1240 ntBASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.82■□□□□ 0.12
CKAP2Q8WWK9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms