Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 AC017083.2-201ENST00000608069 979 ntBASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHKBP1Q8TBC3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 CLK3P2-201ENST00000427566 1453 ntBASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 MIR1909-201ENST00000411312 80 ntBASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 RAB43P1-201ENST00000561790 589 ntBASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 AL391069.4-201ENST00000609583 481 ntBASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 REXO1L8P-201ENST00000604378 1897 ntBASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 AC005052.1-201ENST00000625181 2492 ntBASIC16.67■□□□□ 0.26
SHKBP1Q8TBC3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 RPL13P2-201ENST00000440687 659 ntBASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 BNIP3P1-202ENST00000550043 1585 ntBASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms