Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 CU633904.3-201ENST00000624042 1029 ntBASIC18.95■□□□□ 0.62
SLX4Q8IY92 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 MIR4783-201ENST00000580343 82 ntBASIC18.94■□□□□ 0.62
SLX4Q8IY92 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 AL158070.2-201ENST00000623713 1621 ntBASIC18.94■□□□□ 0.62
SLX4Q8IY92 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLX4Q8IY92 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SLX4Q8IY92 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 OR10B1P-201ENST00000601666 907 ntBASIC18.93■□□□□ 0.62
SLX4Q8IY92 AP003419.4-201ENST00000616071 517 ntBASIC18.93■□□□□ 0.62
SLX4Q8IY92 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.93■□□□□ 0.62
SLX4Q8IY92 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLX4Q8IY92 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLX4Q8IY92 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLX4Q8IY92 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLX4Q8IY92 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms