Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 FAM21FP-201ENST00000426241 1131 ntBASIC16.88■□□□□ 0.29
RNF135Q8IUD6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 AC104596.2-201ENST00000512793 793 ntBASIC16.88■□□□□ 0.29
RNF135Q8IUD6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 AC005052.1-201ENST00000625181 2492 ntBASIC16.88■□□□□ 0.29
RNF135Q8IUD6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 PFN1P12-201ENST00000455938 534 ntBASIC16.87■□□□□ 0.29
RNF135Q8IUD6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 RPSAP52-203ENST00000622976 1023 ntBASIC16.87■□□□□ 0.29
RNF135Q8IUD6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 AL031731.1-201ENST00000642131 2094 ntBASIC16.87■□□□□ 0.29
RNF135Q8IUD6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF135Q8IUD6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 AC006538.1-201ENST00000567905 1585 ntBASIC16.86■□□□□ 0.29
RNF135Q8IUD6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 AC243960.2-201ENST00000600996 747 ntBASIC16.86■□□□□ 0.29
RNF135Q8IUD6 MIR6069-201ENST00000620069 79 ntBASIC16.86■□□□□ 0.29
RNF135Q8IUD6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms