Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC091812.3-201ENST00000621362 345 ntBASIC12.97□□□□□ -0.33
VPS13CQ709C8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 AC022217.1-201ENST00000521069 738 ntBASIC12.97□□□□□ -0.33
VPS13CQ709C8 AC126915.1-201ENST00000522847 1038 ntBASIC12.97□□□□□ -0.33
VPS13CQ709C8 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 AC244452.3-201ENST00000636814 210 ntBASIC12.97□□□□□ -0.33
VPS13CQ709C8 AC011491.1-203ENST00000637688 543 ntBASIC12.97□□□□□ -0.33
VPS13CQ709C8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 AC107373.2-201ENST00000607735 490 ntBASIC12.97□□□□□ -0.33
VPS13CQ709C8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 AR-207ENST00000612010 3896 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 AL157414.3-201ENST00000624276 1954 ntBASIC12.96□□□□□ -0.33
VPS13CQ709C8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 MIR1202-201ENST00000408529 83 ntBASIC12.96□□□□□ -0.33
VPS13CQ709C8 AC008267.1-201ENST00000474858 1069 ntBASIC12.96□□□□□ -0.33
VPS13CQ709C8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 AC008132.1-202ENST00000342005 1389 ntBASIC12.96□□□□□ -0.33
VPS13CQ709C8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.96□□□□□ -0.33
VPS13CQ709C8 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13CQ709C8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13CQ709C8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.96□□□□□ -0.34
VPS13CQ709C8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13CQ709C8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13CQ709C8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.96□□□□□ -0.34
VPS13CQ709C8 HIST2H2BB-201ENST00000449108 381 ntBASIC12.96□□□□□ -0.34
VPS13CQ709C8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13CQ709C8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.96□□□□□ -0.34
VPS13CQ709C8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
VPS13CQ709C8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13CQ709C8 AC099398.1-201ENST00000567919 2776 ntBASIC12.95□□□□□ -0.34
VPS13CQ709C8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 AC093433.1-201ENST00000458048 571 ntBASIC12.95□□□□□ -0.34
VPS13CQ709C8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 COX5BP1-201ENST00000507622 393 ntBASIC12.95□□□□□ -0.34
VPS13CQ709C8 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 CU633904.3-201ENST00000624042 1029 ntBASIC12.95□□□□□ -0.34
VPS13CQ709C8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms