Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 DGCR5-201ENST00000399539 862 ntBASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 AC006449.6-201ENST00000612330 2296 ntBASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 RPL13P2-201ENST00000440687 659 ntBASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 RARRES2P5-201ENST00000564013 466 ntBASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H3F3CQ6NXT2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.71□□□□□ -0.06
H3F3CQ6NXT2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
H3F3CQ6NXT2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
H3F3CQ6NXT2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.71□□□□□ -0.06
H3F3CQ6NXT2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
H3F3CQ6NXT2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
H3F3CQ6NXT2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms