Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 MIR648-201ENST00000385046 94 ntBASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 AC004987.2-201ENST00000395959 1148 ntBASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 AL512638.1-201ENST00000457493 794 ntBASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 SPCS2P1-201ENST00000561636 679 ntBASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 AJ011932.1-201ENST00000621707 465 ntBASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 AP001282.1-201ENST00000531301 1499 ntBASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TTC39BQ5VTQ0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TTC39BQ5VTQ0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TTC39BQ5VTQ0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TTC39BQ5VTQ0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TTC39BQ5VTQ0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 RPL37AP1-201ENST00000412502 279 ntBASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 INGX-202ENST00000489074 768 ntBASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 AL590560.3-201ENST00000623350 461 ntBASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 AC069224.1-201ENST00000566372 1715 ntBASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TTC39BQ5VTQ0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 AC087499.5-201ENST00000452760 1342 ntBASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms