Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 AL133267.1-201ENST00000398220 340 ntBASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 RN7SL560P-201ENST00000577943 264 ntBASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 PFN1P12-201ENST00000455938 534 ntBASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 AP001582.1-201ENST00000525856 295 ntBASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 C2orf69P2-201ENST00000562032 1123 ntBASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM71Q2Q1W2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 AC080080.1-201ENST00000625121 2420 ntBASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 AC006001.1-201ENST00000325130 474 ntBASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 MIR648-201ENST00000385046 94 ntBASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 MIR1247-201ENST00000408206 136 ntBASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 BCYRN1-201ENST00000418539 200 ntBASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 C2orf27AP3-201ENST00000434123 579 ntBASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM71Q2Q1W2 FAM86HP-204ENST00000513466 959 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms