Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
DDR1Q08345 ME2P1-201ENST00000426028 1970 ntBASIC19.44■□□□□ 0.7
DDR1Q08345 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
DDR1Q08345 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
DDR1Q08345 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DDR1Q08345 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.44■□□□□ 0.7
DDR1Q08345 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.44■□□□□ 0.7
DDR1Q08345 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.44■□□□□ 0.7
DDR1Q08345 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.44■□□□□ 0.7
DDR1Q08345 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.44■□□□□ 0.7
DDR1Q08345 LDHBP1-201ENST00000455730 1119 ntBASIC19.44■□□□□ 0.7
DDR1Q08345 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.44■□□□□ 0.7
DDR1Q08345 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.44■□□□□ 0.7
DDR1Q08345 TMEM198B-204ENST00000484016 896 ntBASIC19.44■□□□□ 0.7
DDR1Q08345 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.44■□□□□ 0.7
DDR1Q08345 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.44■□□□□ 0.7
DDR1Q08345 AP001505.2-201ENST00000616815 443 ntBASIC19.44■□□□□ 0.7
DDR1Q08345 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
DDR1Q08345 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.44■□□□□ 0.7
DDR1Q08345 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DDR1Q08345 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDR1Q08345 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDR1Q08345 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.43■□□□□ 0.7
DDR1Q08345 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.43■□□□□ 0.7
DDR1Q08345 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DDR1Q08345 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 TPM3P8-201ENST00000330554 643 ntBASIC19.43■□□□□ 0.7
DDR1Q08345 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.43■□□□□ 0.7
DDR1Q08345 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 AC104457.1-201ENST00000401024 814 ntBASIC19.43■□□□□ 0.7
DDR1Q08345 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.43■□□□□ 0.7
DDR1Q08345 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.43■□□□□ 0.7
DDR1Q08345 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
DDR1Q08345 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.43■□□□□ 0.7
DDR1Q08345 RN7SL720P-201ENST00000488178 304 ntBASIC19.43■□□□□ 0.7
DDR1Q08345 FTLP10-202ENST00000505798 471 ntBASIC19.43■□□□□ 0.7
DDR1Q08345 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.43■□□□□ 0.7
DDR1Q08345 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.43■□□□□ 0.7
DDR1Q08345 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.43■□□□□ 0.7
DDR1Q08345 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.43■□□□□ 0.7
DDR1Q08345 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
DDR1Q08345 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.43■□□□□ 0.7
DDR1Q08345 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDR1Q08345 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DDR1Q08345 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
DDR1Q08345 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.42■□□□□ 0.7
DDR1Q08345 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
DDR1Q08345 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.42■□□□□ 0.7
DDR1Q08345 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
DDR1Q08345 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DDR1Q08345 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.42■□□□□ 0.7
DDR1Q08345 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
DDR1Q08345 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
DDR1Q08345 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDR1Q08345 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
DDR1Q08345 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.42■□□□□ 0.7
DDR1Q08345 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.42■□□□□ 0.7
DDR1Q08345 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.42■□□□□ 0.7
DDR1Q08345 AC245884.6-201ENST00000515672 1067 ntBASIC19.42■□□□□ 0.7
DDR1Q08345 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.42■□□□□ 0.7
DDR1Q08345 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.42■□□□□ 0.7
DDR1Q08345 AC007663.3-201ENST00000609632 465 ntBASIC19.42■□□□□ 0.7
DDR1Q08345 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.42■□□□□ 0.7
DDR1Q08345 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms