Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP1Q04837 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SSBP1Q04837 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SSBP1Q04837 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SSBP1Q04837 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP1Q04837 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP1Q04837 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SSBP1Q04837 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SSBP1Q04837 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SSBP1Q04837 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SSBP1Q04837 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SSBP1Q04837 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SSBP1Q04837 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP1Q04837 DUX4L26-201ENST00000489078 1255 ntBASIC13.48□□□□□ -0.25
SSBP1Q04837 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP1Q04837 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.48□□□□□ -0.25
SSBP1Q04837 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP1Q04837 MTDHP3-201ENST00000594186 672 ntBASIC13.48□□□□□ -0.25
SSBP1Q04837 AC008667.4-201ENST00000607370 168 ntBASIC13.48□□□□□ -0.25
SSBP1Q04837 AC069148.1-201ENST00000608741 768 ntBASIC13.48□□□□□ -0.25
SSBP1Q04837 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP1Q04837 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
SSBP1Q04837 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP1Q04837 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP1Q04837 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.48□□□□□ -0.25
SSBP1Q04837 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SSBP1Q04837 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 AC104581.4-201ENST00000623126 3052 ntBASIC13.48□□□□□ -0.25
SSBP1Q04837 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP1Q04837 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP1Q04837 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
SSBP1Q04837 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP1Q04837 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP1Q04837 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.47□□□□□ -0.25
SSBP1Q04837 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP1Q04837 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP1Q04837 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SSBP1Q04837 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SSBP1Q04837 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP1Q04837 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP1Q04837 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SSBP1Q04837 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SSBP1Q04837 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SSBP1Q04837 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 AL031133.1-201ENST00000406807 723 ntBASIC13.47□□□□□ -0.25
SSBP1Q04837 HMGA1P7-201ENST00000406908 502 ntBASIC13.47□□□□□ -0.25
SSBP1Q04837 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP1Q04837 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.47□□□□□ -0.25
SSBP1Q04837 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP1Q04837 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.47□□□□□ -0.25
SSBP1Q04837 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP1Q04837 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SSBP1Q04837 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.47□□□□□ -0.25
SSBP1Q04837 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP1Q04837 AL355877.3-201ENST00000622820 899 ntBASIC13.47□□□□□ -0.25
SSBP1Q04837 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SSBP1Q04837 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SSBP1Q04837 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.47□□□□□ -0.25
SSBP1Q04837 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP1Q04837 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms