Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEP78395 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 YBX1P5-201ENST00000509441 847 ntBASIC16.11■□□□□ 0.17
PRAMEP78395 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEP78395 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEP78395 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEP78395 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEP78395 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PRAMEP78395 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEP78395 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEP78395 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEP78395 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEP78395 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEP78395 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
PRAMEP78395 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEP78395 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEP78395 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEP78395 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEP78395 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PRAMEP78395 KRT18P32-201ENST00000424695 1287 ntBASIC16.1■□□□□ 0.17
PRAMEP78395 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEP78395 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.1■□□□□ 0.17
PRAMEP78395 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEP78395 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.1■□□□□ 0.17
PRAMEP78395 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.1■□□□□ 0.17
PRAMEP78395 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 AL513210.1-201ENST00000629608 234 ntBASIC16.1■□□□□ 0.17
PRAMEP78395 AC084121.4-201ENST00000641598 221 ntBASIC16.1■□□□□ 0.17
PRAMEP78395 AF228730.8-201ENST00000642140 221 ntBASIC16.1■□□□□ 0.17
PRAMEP78395 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEP78395 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEP78395 AL691432.1-201ENST00000596308 1422 ntBASIC16.1■□□□□ 0.17
PRAMEP78395 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEP78395 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEP78395 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEP78395 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 AP3S2-216ENST00000617003 1561 ntBASIC16.09■□□□□ 0.17
PRAMEP78395 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEP78395 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEP78395 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEP78395 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEP78395 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEP78395 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEP78395 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEP78395 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEP78395 UPF3AP3-201ENST00000420996 769 ntBASIC16.09■□□□□ 0.17
PRAMEP78395 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEP78395 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
PRAMEP78395 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEP78395 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEP78395 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEP78395 AC092865.5-201ENST00000545435 363 ntBASIC16.09■□□□□ 0.17
PRAMEP78395 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEP78395 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEP78395 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
PRAMEP78395 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEP78395 AC026979.3-201ENST00000607315 403 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms