Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTA1P68133 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 KRT8P44-201ENST00000441609 1350 ntBASIC14.22□□□□□ -0.13
ACTA1P68133 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.22□□□□□ -0.13
ACTA1P68133 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.22□□□□□ -0.13
ACTA1P68133 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.22□□□□□ -0.13
ACTA1P68133 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 HNRNPDP1-201ENST00000439535 754 ntBASIC14.22□□□□□ -0.13
ACTA1P68133 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.22□□□□□ -0.13
ACTA1P68133 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.22□□□□□ -0.13
ACTA1P68133 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.22□□□□□ -0.13
ACTA1P68133 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ACTA1P68133 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.22□□□□□ -0.13
ACTA1P68133 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTA1P68133 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTA1P68133 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTA1P68133 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
ACTA1P68133 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
ACTA1P68133 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
ACTA1P68133 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.21□□□□□ -0.13
ACTA1P68133 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ACTA1P68133 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.21□□□□□ -0.13
ACTA1P68133 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ACTA1P68133 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTA1P68133 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.21□□□□□ -0.13
ACTA1P68133 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.21□□□□□ -0.13
ACTA1P68133 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.21□□□□□ -0.13
ACTA1P68133 AL645939.2-201ENST00000427340 991 ntBASIC14.21□□□□□ -0.13
ACTA1P68133 FAAHP1-202ENST00000446499 1238 ntBASIC14.21□□□□□ -0.13
ACTA1P68133 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTA1P68133 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.21□□□□□ -0.13
ACTA1P68133 AC096734.2-201ENST00000562054 433 ntBASIC14.21□□□□□ -0.13
ACTA1P68133 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.21□□□□□ -0.13
ACTA1P68133 AC024267.1-201ENST00000582320 895 ntBASIC14.21□□□□□ -0.13
ACTA1P68133 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ACTA1P68133 AC007064.4-201ENST00000637740 555 ntBASIC14.21□□□□□ -0.13
ACTA1P68133 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ACTA1P68133 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.21□□□□□ -0.13
ACTA1P68133 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTA1P68133 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
ACTA1P68133 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTA1P68133 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms