Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.74■□□□□ 0.27
USP46P62068 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USP46P62068 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
USP46P62068 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USP46P62068 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.74■□□□□ 0.27
USP46P62068 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.74■□□□□ 0.27
USP46P62068 DFFBP1-201ENST00000433250 979 ntBASIC16.74■□□□□ 0.27
USP46P62068 AL353779.1-201ENST00000434793 351 ntBASIC16.74■□□□□ 0.27
USP46P62068 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.74■□□□□ 0.27
USP46P62068 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
USP46P62068 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.74■□□□□ 0.27
USP46P62068 AL596325.1-201ENST00000563991 1082 ntBASIC16.74■□□□□ 0.27
USP46P62068 TP53TG3HP-202ENST00000569755 579 ntBASIC16.74■□□□□ 0.27
USP46P62068 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.74■□□□□ 0.27
USP46P62068 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.74■□□□□ 0.27
USP46P62068 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.74■□□□□ 0.27
USP46P62068 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.74■□□□□ 0.27
USP46P62068 LINC02228-204ENST00000642115 2962 ntBASIC16.74■□□□□ 0.27
USP46P62068 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USP46P62068 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
USP46P62068 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP46P62068 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
USP46P62068 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
USP46P62068 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
USP46P62068 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.73■□□□□ 0.27
USP46P62068 REXO1L1P-202ENST00000608646 1974 ntBASIC16.73■□□□□ 0.27
USP46P62068 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.73■□□□□ 0.27
USP46P62068 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
USP46P62068 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USP46P62068 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
USP46P62068 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.73■□□□□ 0.27
USP46P62068 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
USP46P62068 AC005034.1-201ENST00000426657 489 ntBASIC16.73■□□□□ 0.27
USP46P62068 RN7SL692P-201ENST00000464677 288 ntBASIC16.73■□□□□ 0.27
USP46P62068 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
USP46P62068 TPRX2P-201ENST00000535362 881 ntBASIC16.73■□□□□ 0.27
USP46P62068 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
USP46P62068 AC092337.1-201ENST00000568699 1129 ntBASIC16.73■□□□□ 0.27
USP46P62068 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.73■□□□□ 0.27
USP46P62068 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
USP46P62068 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.73■□□□□ 0.27
USP46P62068 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.73■□□□□ 0.27
USP46P62068 AL035252.4-201ENST00000624174 288 ntBASIC16.73■□□□□ 0.27
USP46P62068 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.73■□□□□ 0.27
USP46P62068 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 SLC7A15P-201ENST00000424028 1363 ntBASIC16.73■□□□□ 0.27
USP46P62068 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.73■□□□□ 0.27
USP46P62068 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 AC018892.3-201ENST00000623986 2499 ntBASIC16.73■□□□□ 0.27
USP46P62068 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP46P62068 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
USP46P62068 AC006449.5-201ENST00000610658 2098 ntBASIC16.73■□□□□ 0.27
USP46P62068 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.73■□□□□ 0.27
USP46P62068 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.72■□□□□ 0.27
USP46P62068 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.72■□□□□ 0.27
USP46P62068 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
USP46P62068 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.72■□□□□ 0.27
USP46P62068 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.72■□□□□ 0.27
USP46P62068 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 TARDBPP1-201ENST00000442013 1203 ntBASIC16.72■□□□□ 0.27
USP46P62068 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 AC093004.1-201ENST00000508850 424 ntBASIC16.72■□□□□ 0.27
USP46P62068 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
USP46P62068 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.72■□□□□ 0.27
USP46P62068 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.72■□□□□ 0.27
USP46P62068 WASH4P-201ENST00000564273 1246 ntBASIC16.72■□□□□ 0.27
USP46P62068 AC140912.1-201ENST00000577171 1054 ntBASIC16.72■□□□□ 0.27
USP46P62068 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.72■□□□□ 0.27
USP46P62068 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms