Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLTCL1P53675 AC020916.1-201ENST00000587762 1774 ntBASIC22.27■■□□□ 1.16
CLTCL1P53675 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC22.27■■□□□ 1.16
CLTCL1P53675 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC22.27■■□□□ 1.16
CLTCL1P53675 ILF3-AS1-201ENST00000591501 1983 ntBASIC22.27■■□□□ 1.16
CLTCL1P53675 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CLTCL1P53675 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.27■■□□□ 1.16
CLTCL1P53675 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLTCL1P53675 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLTCL1P53675 AL023775.1-201ENST00000454907 1746 ntBASIC22.27■■□□□ 1.16
CLTCL1P53675 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
CLTCL1P53675 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLTCL1P53675 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLTCL1P53675 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC22.27■■□□□ 1.16
CLTCL1P53675 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC22.27■■□□□ 1.16
CLTCL1P53675 MIR663B-201ENST00000408361 115 ntBASIC22.27■■□□□ 1.16
CLTCL1P53675 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC22.27■■□□□ 1.16
CLTCL1P53675 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC22.27■■□□□ 1.16
CLTCL1P53675 HOMER2P2-201ENST00000451621 847 ntBASIC22.27■■□□□ 1.16
CLTCL1P53675 TPI1-206ENST00000488464 791 ntTSL 5 BASIC22.27■■□□□ 1.16
CLTCL1P53675 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC22.27■■□□□ 1.16
CLTCL1P53675 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC22.27■■□□□ 1.16
CLTCL1P53675 RN7SL48P-201ENST00000579283 293 ntBASIC22.27■■□□□ 1.16
CLTCL1P53675 AC091271.1-201ENST00000611877 1162 ntBASIC22.27■■□□□ 1.16
CLTCL1P53675 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC22.27■■□□□ 1.16
CLTCL1P53675 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC22.26■■□□□ 1.15
CLTCL1P53675 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC22.26■■□□□ 1.15
CLTCL1P53675 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC22.26■■□□□ 1.15
CLTCL1P53675 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CLTCL1P53675 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC22.26■■□□□ 1.15
CLTCL1P53675 AC023310.1-201ENST00000554836 735 ntBASIC22.26■■□□□ 1.15
CLTCL1P53675 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC22.26■■□□□ 1.15
CLTCL1P53675 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CLTCL1P53675 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC22.26■■□□□ 1.15
CLTCL1P53675 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC22.26■■□□□ 1.15
CLTCL1P53675 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
CLTCL1P53675 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLTCL1P53675 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC22.25■■□□□ 1.15
CLTCL1P53675 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 HLA-K-203ENST00000430151 1046 ntBASIC22.25■■□□□ 1.15
CLTCL1P53675 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC22.25■■□□□ 1.15
CLTCL1P53675 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC22.25■■□□□ 1.15
CLTCL1P53675 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CLTCL1P53675 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC22.25■■□□□ 1.15
CLTCL1P53675 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC22.25■■□□□ 1.15
CLTCL1P53675 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC22.25■■□□□ 1.15
CLTCL1P53675 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
CLTCL1P53675 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC22.25■■□□□ 1.15
CLTCL1P53675 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLTCL1P53675 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
CLTCL1P53675 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 MPV17-205ENST00000402310 906 ntTSL 5 BASIC22.24■■□□□ 1.15
CLTCL1P53675 NME6-203ENST00000415644 849 ntTSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 SAMD11P1-201ENST00000571429 661 ntBASIC22.24■■□□□ 1.15
CLTCL1P53675 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC22.24■■□□□ 1.15
CLTCL1P53675 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 AC007787.1-201ENST00000588095 1583 ntBASIC22.24■■□□□ 1.15
CLTCL1P53675 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CLTCL1P53675 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CLTCL1P53675 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLTCL1P53675 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CLTCL1P53675 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms