Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GTF2A1P52655 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GTF2A1P52655 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 AC011474.4-201ENST00000623523 2076 ntBASIC15.66■□□□□ 0.1
GTF2A1P52655 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
GTF2A1P52655 KRT8P47-201ENST00000604727 1398 ntBASIC15.66■□□□□ 0.1
GTF2A1P52655 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.66■□□□□ 0.1
GTF2A1P52655 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 AL390955.1-201ENST00000428694 934 ntBASIC15.66■□□□□ 0.1
GTF2A1P52655 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.66■□□□□ 0.1
GTF2A1P52655 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 AP003071.4-201ENST00000562276 1284 ntBASIC15.66■□□□□ 0.1
GTF2A1P52655 AP001412.1-201ENST00000608405 714 ntBASIC15.66■□□□□ 0.1
GTF2A1P52655 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.66■□□□□ 0.1
GTF2A1P52655 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.66■□□□□ 0.1
GTF2A1P52655 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
GTF2A1P52655 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
GTF2A1P52655 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC15.66■□□□□ 0.1
GTF2A1P52655 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GTF2A1P52655 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GTF2A1P52655 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.65■□□□□ 0.1
GTF2A1P52655 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.65■□□□□ 0.1
GTF2A1P52655 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.65■□□□□ 0.1
GTF2A1P52655 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 AC012618.2-201ENST00000428058 849 ntBASIC15.65■□□□□ 0.1
GTF2A1P52655 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
GTF2A1P52655 RBM17P1-201ENST00000453646 1190 ntBASIC15.65■□□□□ 0.1
GTF2A1P52655 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 AC142381.4-202ENST00000563973 229 ntBASIC15.65■□□□□ 0.1
GTF2A1P52655 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.65■□□□□ 0.1
GTF2A1P52655 AC116562.4-202ENST00000641738 218 ntBASIC15.65■□□□□ 0.1
GTF2A1P52655 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.65■□□□□ 0.1
GTF2A1P52655 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 BEND3P3-201ENST00000611030 2440 ntBASIC15.65■□□□□ 0.1
GTF2A1P52655 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GTF2A1P52655 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GTF2A1P52655 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.65■□□□□ 0.1
GTF2A1P52655 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC15.65■□□□□ 0.1
GTF2A1P52655 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GTF2A1P52655 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.64■□□□□ 0.1
GTF2A1P52655 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.64■□□□□ 0.1
GTF2A1P52655 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
GTF2A1P52655 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GTF2A1P52655 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
GTF2A1P52655 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GTF2A1P52655 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GTF2A1P52655 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GTF2A1P52655 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GTF2A1P52655 SLC22A20-204ENST00000530038 1673 ntBASIC15.64■□□□□ 0.09
GTF2A1P52655 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.64■□□□□ 0.09
GTF2A1P52655 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.64■□□□□ 0.09
GTF2A1P52655 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms