Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.44■□□□□ 0.22
NEK3P51956 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NEK3P51956 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.43■□□□□ 0.22
NEK3P51956 AC006058.4-201ENST00000624016 1670 ntBASIC16.43■□□□□ 0.22
NEK3P51956 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NEK3P51956 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.43■□□□□ 0.22
NEK3P51956 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NEK3P51956 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 AL035456.1-201ENST00000456064 1369 ntBASIC16.43■□□□□ 0.22
NEK3P51956 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NEK3P51956 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.43■□□□□ 0.22
NEK3P51956 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.43■□□□□ 0.22
NEK3P51956 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.43■□□□□ 0.22
NEK3P51956 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.43■□□□□ 0.22
NEK3P51956 AL390754.1-201ENST00000619088 582 ntBASIC16.43■□□□□ 0.22
NEK3P51956 AC099063.4-201ENST00000641099 1602 ntBASIC16.43■□□□□ 0.22
NEK3P51956 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
NEK3P51956 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NEK3P51956 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NEK3P51956 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.43■□□□□ 0.22
NEK3P51956 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEK3P51956 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.43■□□□□ 0.22
NEK3P51956 PRAL-201ENST00000624952 3286 ntBASIC16.43■□□□□ 0.22
NEK3P51956 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.42■□□□□ 0.22
NEK3P51956 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.42■□□□□ 0.22
NEK3P51956 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 TNRC18P2-201ENST00000417666 2714 ntBASIC16.42■□□□□ 0.22
NEK3P51956 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NEK3P51956 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.42■□□□□ 0.22
NEK3P51956 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.42■□□□□ 0.22
NEK3P51956 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 AP002414.2-201ENST00000591780 3365 ntBASIC16.42■□□□□ 0.22
NEK3P51956 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.42■□□□□ 0.22
NEK3P51956 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.42■□□□□ 0.22
NEK3P51956 AL589702.1-201ENST00000641229 1509 ntBASIC16.42■□□□□ 0.22
NEK3P51956 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.42■□□□□ 0.22
NEK3P51956 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.42■□□□□ 0.22
NEK3P51956 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.42■□□□□ 0.22
NEK3P51956 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 INGX-202ENST00000489074 768 ntBASIC16.42■□□□□ 0.22
NEK3P51956 AC097493.3-201ENST00000509725 367 ntBASIC16.42■□□□□ 0.22
NEK3P51956 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.42■□□□□ 0.22
NEK3P51956 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.42■□□□□ 0.22
NEK3P51956 MIR3197-201ENST00000582241 73 ntBASIC16.42■□□□□ 0.22
NEK3P51956 AC024267.1-201ENST00000582320 895 ntBASIC16.42■□□□□ 0.22
NEK3P51956 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.42■□□□□ 0.22
NEK3P51956 AC073592.8-201ENST00000624126 511 ntBASIC16.42■□□□□ 0.22
NEK3P51956 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.42■□□□□ 0.22
NEK3P51956 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.42■□□□□ 0.22
NEK3P51956 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NEK3P51956 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NEK3P51956 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NEK3P51956 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NEK3P51956 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NEK3P51956 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEK3P51956 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.41■□□□□ 0.22
NEK3P51956 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.41■□□□□ 0.22
NEK3P51956 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEK3P51956 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.41■□□□□ 0.22
NEK3P51956 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEK3P51956 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.41■□□□□ 0.22
NEK3P51956 AL592424.1-201ENST00000563624 1536 ntBASIC16.41■□□□□ 0.22
NEK3P51956 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEK3P51956 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEK3P51956 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEK3P51956 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.41■□□□□ 0.22
NEK3P51956 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEK3P51956 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NEK3P51956 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms