Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.74■□□□□ 0.27
GRIK1P39086 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIK1P39086 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIK1P39086 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIK1P39086 RN7SL692P-201ENST00000464677 288 ntBASIC16.74■□□□□ 0.27
GRIK1P39086 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIK1P39086 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GRIK1P39086 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GRIK1P39086 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIK1P39086 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIK1P39086 AC012645.4-201ENST00000610691 1061 ntBASIC16.74■□□□□ 0.27
GRIK1P39086 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIK1P39086 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIK1P39086 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.74■□□□□ 0.27
GRIK1P39086 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GRIK1P39086 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIK1P39086 AL391005.1-201ENST00000623953 2435 ntBASIC16.74■□□□□ 0.27
GRIK1P39086 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIK1P39086 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIK1P39086 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIK1P39086 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIK1P39086 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIK1P39086 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
GRIK1P39086 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIK1P39086 AC074338.1-201ENST00000416825 156 ntBASIC16.73■□□□□ 0.27
GRIK1P39086 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 AC005034.1-201ENST00000426657 489 ntBASIC16.73■□□□□ 0.27
GRIK1P39086 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIK1P39086 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.73■□□□□ 0.27
GRIK1P39086 AL596325.1-201ENST00000563991 1082 ntBASIC16.73■□□□□ 0.27
GRIK1P39086 AC008494.3-201ENST00000606615 944 ntBASIC16.73■□□□□ 0.27
GRIK1P39086 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.73■□□□□ 0.27
GRIK1P39086 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 CYP2T1P-202ENST00000641596 2535 ntBASIC16.73■□□□□ 0.27
GRIK1P39086 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIK1P39086 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIK1P39086 AC046158.3-201ENST00000624947 2558 ntBASIC16.73■□□□□ 0.27
GRIK1P39086 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIK1P39086 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GRIK1P39086 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.72■□□□□ 0.27
GRIK1P39086 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.72■□□□□ 0.27
GRIK1P39086 RPL13P2-201ENST00000440687 659 ntBASIC16.72■□□□□ 0.27
GRIK1P39086 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.72■□□□□ 0.27
GRIK1P39086 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIK1P39086 HNRNPUP1-201ENST00000554987 333 ntBASIC16.72■□□□□ 0.27
GRIK1P39086 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms