Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.42■□□□□ 0.7
TM4SF1P30408 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.42■□□□□ 0.7
TM4SF1P30408 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.42■□□□□ 0.7
TM4SF1P30408 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TM4SF1P30408 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF1P30408 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF1P30408 TUBBP5-203ENST00000508529 1334 ntBASIC19.42■□□□□ 0.7
TM4SF1P30408 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TM4SF1P30408 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
TM4SF1P30408 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.41■□□□□ 0.7
TM4SF1P30408 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TM4SF1P30408 AC011477.6-201ENST00000604980 1927 ntBASIC19.41■□□□□ 0.7
TM4SF1P30408 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.41■□□□□ 0.7
TM4SF1P30408 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TM4SF1P30408 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.41■□□□□ 0.7
TM4SF1P30408 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TM4SF1P30408 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TM4SF1P30408 AC079178.1-201ENST00000420915 656 ntBASIC19.41■□□□□ 0.7
TM4SF1P30408 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.41■□□□□ 0.7
TM4SF1P30408 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.41■□□□□ 0.7
TM4SF1P30408 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 SPTLC1P5-201ENST00000450718 252 ntBASIC19.41■□□□□ 0.7
TM4SF1P30408 RPS2P36-201ENST00000456516 831 ntBASIC19.41■□□□□ 0.7
TM4SF1P30408 SERPINA13P-202ENST00000478994 924 ntBASIC19.41■□□□□ 0.7
TM4SF1P30408 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.41■□□□□ 0.7
TM4SF1P30408 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.41■□□□□ 0.7
TM4SF1P30408 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.41■□□□□ 0.7
TM4SF1P30408 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.41■□□□□ 0.7
TM4SF1P30408 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.41■□□□□ 0.7
TM4SF1P30408 AC007663.3-201ENST00000609632 465 ntBASIC19.41■□□□□ 0.7
TM4SF1P30408 ENPP7P14-201ENST00000621765 1040 ntBASIC19.41■□□□□ 0.7
TM4SF1P30408 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.41■□□□□ 0.7
TM4SF1P30408 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TM4SF1P30408 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TM4SF1P30408 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.41■□□□□ 0.7
TM4SF1P30408 AC006449.6-201ENST00000612330 2296 ntBASIC19.41■□□□□ 0.7
TM4SF1P30408 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TM4SF1P30408 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF1P30408 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF1P30408 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TM4SF1P30408 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF1P30408 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.4■□□□□ 0.7
TM4SF1P30408 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.4■□□□□ 0.7
TM4SF1P30408 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 COX5BP1-201ENST00000507622 393 ntBASIC19.4■□□□□ 0.7
TM4SF1P30408 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.4■□□□□ 0.7
TM4SF1P30408 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.4■□□□□ 0.7
TM4SF1P30408 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TM4SF1P30408 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF1P30408 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF1P30408 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.4■□□□□ 0.7
TM4SF1P30408 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TM4SF1P30408 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF1P30408 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF1P30408 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TM4SF1P30408 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TM4SF1P30408 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TM4SF1P30408 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF1P30408 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.39■□□□□ 0.69
TM4SF1P30408 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF1P30408 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TM4SF1P30408 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.39■□□□□ 0.69
TM4SF1P30408 TMEM198B-204ENST00000484016 896 ntBASIC19.39■□□□□ 0.69
TM4SF1P30408 RN7SL720P-201ENST00000488178 304 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms