Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTPN3P26045 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PTPN3P26045 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN3P26045 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 KRT8P12-202ENST00000472924 1397 ntBASIC16.21■□□□□ 0.19
PTPN3P26045 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PTPN3P26045 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN3P26045 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN3P26045 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PTPN3P26045 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.21■□□□□ 0.18
PTPN3P26045 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
PTPN3P26045 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
PTPN3P26045 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN3P26045 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN3P26045 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN3P26045 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.21■□□□□ 0.18
PTPN3P26045 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN3P26045 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PTPN3P26045 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.21■□□□□ 0.18
PTPN3P26045 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PTPN3P26045 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
PTPN3P26045 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTPN3P26045 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN3P26045 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN3P26045 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN3P26045 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 AC136604.1-201ENST00000418535 575 ntBASIC16.2■□□□□ 0.18
PTPN3P26045 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.2■□□□□ 0.18
PTPN3P26045 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN3P26045 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN3P26045 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN3P26045 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN3P26045 AL079307.3-201ENST00000556114 283 ntBASIC16.2■□□□□ 0.18
PTPN3P26045 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.2■□□□□ 0.18
PTPN3P26045 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN3P26045 AC079781.4-201ENST00000641908 219 ntBASIC16.2■□□□□ 0.18
PTPN3P26045 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN3P26045 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN3P26045 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN3P26045 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN3P26045 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTPN3P26045 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PTPN3P26045 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN3P26045 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PTPN3P26045 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN3P26045 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN3P26045 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN3P26045 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 AC087481.3-201ENST00000602886 1894 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN3P26045 AL607033.1-201ENST00000623900 1599 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PTPN3P26045 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PTPN3P26045 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 FO393414.2-201ENST00000405153 598 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN3P26045 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN3P26045 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN3P26045 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN3P26045 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN3P26045 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PTPN3P26045 AP001160.2-201ENST00000596071 487 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 Z92544.3-201ENST00000624747 417 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PTPN3P26045 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms