Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 TMBIM7P-203ENST00000641617 1718 ntBASIC13.36□□□□□ -0.27
LMO1P25800 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LMO1P25800 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO1P25800 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LMO1P25800 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.36□□□□□ -0.27
LMO1P25800 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO1P25800 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LMO1P25800 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.36□□□□□ -0.27
LMO1P25800 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
LMO1P25800 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LMO1P25800 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO1P25800 KRT18P32-201ENST00000424695 1287 ntBASIC13.36□□□□□ -0.27
LMO1P25800 AL353705.2-201ENST00000428243 662 ntBASIC13.36□□□□□ -0.27
LMO1P25800 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO1P25800 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.36□□□□□ -0.27
LMO1P25800 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO1P25800 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO1P25800 AC093520.2-201ENST00000561830 333 ntBASIC13.36□□□□□ -0.27
LMO1P25800 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO1P25800 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO1P25800 AC004835.2-201ENST00000603762 682 ntBASIC13.36□□□□□ -0.27
LMO1P25800 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO1P25800 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 AC105250.1-201ENST00000509378 2057 ntBASIC13.36□□□□□ -0.27
LMO1P25800 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
LMO1P25800 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO1P25800 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO1P25800 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO1P25800 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO1P25800 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LMO1P25800 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.35□□□□□ -0.27
LMO1P25800 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 AC005089.1-201ENST00000619486 2241 ntBASIC13.35□□□□□ -0.27
LMO1P25800 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 AC007292.2-201ENST00000593524 1812 ntBASIC13.35□□□□□ -0.27
LMO1P25800 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LMO1P25800 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LMO1P25800 GPS2P2-201ENST00000430745 888 ntBASIC13.35□□□□□ -0.27
LMO1P25800 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.35□□□□□ -0.27
LMO1P25800 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.35□□□□□ -0.27
LMO1P25800 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 SSR4P1-203ENST00000599569 2260 ntBASIC13.35□□□□□ -0.27
LMO1P25800 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LMO1P25800 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.35□□□□□ -0.27
LMO1P25800 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LMO1P25800 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 AL359258.3-201ENST00000622910 2331 ntBASIC13.35□□□□□ -0.27
LMO1P25800 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LMO1P25800 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LMO1P25800 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO1P25800 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms