Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VCLP18206 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
VCLP18206 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VCLP18206 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VCLP18206 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
VCLP18206 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.06■□□□□ 0.16
VCLP18206 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.06■□□□□ 0.16
VCLP18206 AL592424.1-201ENST00000563624 1536 ntBASIC16.06■□□□□ 0.16
VCLP18206 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.06■□□□□ 0.16
VCLP18206 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.06■□□□□ 0.16
VCLP18206 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
VCLP18206 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 AL353705.2-201ENST00000428243 662 ntBASIC16.06■□□□□ 0.16
VCLP18206 SPDYE14P-201ENST00000442619 822 ntBASIC16.06■□□□□ 0.16
VCLP18206 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.06■□□□□ 0.16
VCLP18206 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.06■□□□□ 0.16
VCLP18206 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.06■□□□□ 0.16
VCLP18206 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.06■□□□□ 0.16
VCLP18206 AC015911.4-201ENST00000588022 1070 ntBASIC16.06■□□□□ 0.16
VCLP18206 AL365330.1-201ENST00000607459 531 ntBASIC16.06■□□□□ 0.16
VCLP18206 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VCLP18206 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.06■□□□□ 0.16
VCLP18206 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VCLP18206 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.06■□□□□ 0.16
VCLP18206 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.06■□□□□ 0.16
VCLP18206 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VCLP18206 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
VCLP18206 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.05■□□□□ 0.16
VCLP18206 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.05■□□□□ 0.16
VCLP18206 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 AP3S2-216ENST00000617003 1561 ntBASIC16.05■□□□□ 0.16
VCLP18206 AL589702.1-201ENST00000641229 1509 ntBASIC16.05■□□□□ 0.16
VCLP18206 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
VCLP18206 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VCLP18206 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.05■□□□□ 0.16
VCLP18206 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VCLP18206 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
VCLP18206 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.05■□□□□ 0.16
VCLP18206 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.05■□□□□ 0.16
VCLP18206 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.05■□□□□ 0.16
VCLP18206 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 AC018529.1-201ENST00000613063 361 ntBASIC16.05■□□□□ 0.16
VCLP18206 Z92544.3-201ENST00000624747 417 ntBASIC16.05■□□□□ 0.16
VCLP18206 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.05■□□□□ 0.16
VCLP18206 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 AC010491.1-201ENST00000563101 2797 ntBASIC16.05■□□□□ 0.16
VCLP18206 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
VCLP18206 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VCLP18206 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.05■□□□□ 0.16
VCLP18206 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VCLP18206 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.05■□□□□ 0.16
VCLP18206 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.05■□□□□ 0.16
VCLP18206 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
VCLP18206 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.05■□□□□ 0.16
VCLP18206 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.04■□□□□ 0.16
VCLP18206 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VCLP18206 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
VCLP18206 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VCLP18206 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms