Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SERBP1P3-201ENST00000459980 809 ntBASIC16.35■□□□□ 0.21
ERCC2P18074 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.35■□□□□ 0.21
ERCC2P18074 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC2P18074 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC2P18074 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC2P18074 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC2P18074 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.35■□□□□ 0.21
ERCC2P18074 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.35■□□□□ 0.21
ERCC2P18074 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
ERCC2P18074 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ERCC2P18074 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC2P18074 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.35■□□□□ 0.21
ERCC2P18074 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC2P18074 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC2P18074 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC2P18074 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC2P18074 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC2P18074 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC2P18074 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC2P18074 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC2P18074 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC2P18074 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ERCC2P18074 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ERCC2P18074 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.34■□□□□ 0.21
ERCC2P18074 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.34■□□□□ 0.21
ERCC2P18074 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ERCC2P18074 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.34■□□□□ 0.21
ERCC2P18074 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.34■□□□□ 0.21
ERCC2P18074 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.34■□□□□ 0.21
ERCC2P18074 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.34■□□□□ 0.21
ERCC2P18074 AL512361.1-201ENST00000554200 418 ntBASIC16.34■□□□□ 0.21
ERCC2P18074 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.34■□□□□ 0.21
ERCC2P18074 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.34■□□□□ 0.21
ERCC2P18074 AC106028.4-201ENST00000614509 607 ntBASIC16.34■□□□□ 0.21
ERCC2P18074 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
ERCC2P18074 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ERCC2P18074 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.34■□□□□ 0.21
ERCC2P18074 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.34■□□□□ 0.21
ERCC2P18074 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.34■□□□□ 0.21
ERCC2P18074 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ERCC2P18074 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 HYMAI-201ENST00000635591 3347 ntBASIC16.34■□□□□ 0.21
ERCC2P18074 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC2P18074 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC2P18074 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.33■□□□□ 0.21
ERCC2P18074 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC2P18074 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
ERCC2P18074 AL162727.3-201ENST00000635661 2787 ntBASIC16.33■□□□□ 0.21
ERCC2P18074 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC2P18074 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.33■□□□□ 0.21
ERCC2P18074 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC2P18074 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC2P18074 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC2P18074 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC2P18074 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC2P18074 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.33■□□□□ 0.2
ERCC2P18074 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC2P18074 PMS2P2-201ENST00000425039 1128 ntBASIC16.33■□□□□ 0.2
ERCC2P18074 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC2P18074 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.33■□□□□ 0.2
ERCC2P18074 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ERCC2P18074 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.33■□□□□ 0.2
ERCC2P18074 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.33■□□□□ 0.2
ERCC2P18074 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.33■□□□□ 0.2
ERCC2P18074 AC093512.1-201ENST00000617969 520 ntBASIC16.33■□□□□ 0.2
ERCC2P18074 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.33■□□□□ 0.2
ERCC2P18074 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC2P18074 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC2P18074 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC2P18074 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC2P18074 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms