Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AL591163.1-201ENST00000641757 987 ntBASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AC007950.2-201ENST00000615045 2347 ntBASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AC092171.3-201ENST00000610122 2651 ntBASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 AL596257.1-201ENST00000641463 2694 ntBASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40ALP0C0E4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 AZGP1P1-201ENST00000411909 902 ntBASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 AC098850.1-201ENST00000419919 790 ntBASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 RN7SL837P-201ENST00000463010 287 ntBASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms