Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HOXC6P09630 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC6P09630 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
HOXC6P09630 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXC6P09630 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXC6P09630 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC6P09630 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXC6P09630 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC6P09630 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC6P09630 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC6P09630 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.8■□□□□ 0.44
HOXC6P09630 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC6P09630 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HOXC6P09630 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HOXC6P09630 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC6P09630 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXC6P09630 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXC6P09630 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXC6P09630 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HOXC6P09630 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 MIR326-201ENST00000362220 95 ntBASIC17.79■□□□□ 0.44
HOXC6P09630 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXC6P09630 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 AL133267.1-201ENST00000398220 340 ntBASIC17.79■□□□□ 0.44
HOXC6P09630 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.79■□□□□ 0.44
HOXC6P09630 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HOXC6P09630 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.79■□□□□ 0.44
HOXC6P09630 AP005019.2-201ENST00000615104 511 ntBASIC17.79■□□□□ 0.44
HOXC6P09630 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXC6P09630 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXC6P09630 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXC6P09630 PCDHA14-201ENST00000506751 2298 ntBASIC17.79■□□□□ 0.44
HOXC6P09630 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HOXC6P09630 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXC6P09630 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HOXC6P09630 ME2P1-201ENST00000426028 1970 ntBASIC17.79■□□□□ 0.44
HOXC6P09630 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC6P09630 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
HOXC6P09630 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HOXC6P09630 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HOXC6P09630 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.78■□□□□ 0.44
HOXC6P09630 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.78■□□□□ 0.44
HOXC6P09630 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.78■□□□□ 0.44
HOXC6P09630 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.78■□□□□ 0.44
HOXC6P09630 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.78■□□□□ 0.44
HOXC6P09630 AL118558.3-201ENST00000607414 1079 ntBASIC17.78■□□□□ 0.44
HOXC6P09630 AC132938.4-201ENST00000623835 848 ntBASIC17.78■□□□□ 0.44
HOXC6P09630 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HOXC6P09630 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
HOXC6P09630 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HOXC6P09630 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HOXC6P09630 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HOXC6P09630 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXC6P09630 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms